PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU10427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 35830.4 Da PI: 6.1823 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.2 | 1.7e-14 | 100 | 146 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h Er RR+r+++ feeL++llP++ ++K +K++i+ ++v+YIk+L+ PHU10427.1 100 HIRTERERRKRMRNMFEELQTLLPHL----QPKADKSSIVDETVRYIKMLE 146 7889*********************9....79****************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MNEGGENDFL IWENDEVWSF LNSDNGQLVG SSVEFVGDKL PDSNRSNTCQ ALTTVKEVGE 60 ASLDGKKKCR SNKKKGTNES CEPKSGANGD GGRESGHELH IRTERERRKR MRNMFEELQT 120 LLPHLQPKAD KSSIVDETVR YIKMLENTVD NLKEQKLERI QLGIARLSTM NNPVMTPQKL 180 RVGTSWEQFL ADKGSASNSA AITPKNNNNV TSIPLLNTNV PTDFETWSSD NVVLNVCGEE 240 AYISVCCPKK PGIFTFICHV LEKNKIDIVH ADVSSDQFRN LFMIQTHARG ASGLEQLISG 300 ALSVEDMYKQ AAHEIMSGIN PK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 2e-34 | bHLH family protein |