PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU10426.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 35819.4 Da PI: 6.3203 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.4 | 7.2e-15 | 100 | 146 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er RR+r+++ feeL++llP++ ++K +K++i+ ++v+YIk+L+ PHU10426.1 100 HIRMERERRKRMRNMFEELQTLLPHL----QPKADKSSIVDETVRYIKMLE 146 889**********************9....79****************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MNEGGENDFL IWENDEVWSF LNSDNNQLVG SGVEFVGDKL PDPNRSNTCQ ELTAVKEVGK 60 ASLGGKKRCR SNEKKGTNES GEPKSGANGD GGRELGHELH IRMERERRKR MRNMFEELQT 120 LLPHLQPKAD KSSIVDETVR YIKMLENTVD NLKEQKLERI QLGIARLSTM NNPVMTPQKL 180 RVGTSWEQFL ADKGSASNSA AITPKNNNNV TGIPLLNTNV PTDFETWSSD NVVLNVCGEE 240 AHISVCCPKK PGLFTFICHV LEKNKIDIVH ADVSSDQFRN LFMIQTHARG ASGLEQLISG 300 ALSVEDMYKQ AAHEIMSGIN PK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 4e-36 | bHLH family protein |