PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10334.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 270aa MW: 31361.2 Da PI: 4.9041

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.2	4e-10	2	45	46	93
EEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 46 WevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 W++++ +k++++++++ GW +F ++n ++ gDf++F +dg+ f PHU10334.1 2 WTIEV--TKTGREFYFQYGWVKFIEDNTVEFGDFFIFDYDGNGIF--D 45 99999..********************************998766..3 PP
2	B3	35	2.6e-11	171	247	12	90
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 ++++l +p + ++ +++k + +t++d+ gr++e k++ +k + r++lt+GW++ ++ n + +D ++ ++++ +++ PHU10334.1 171 RRNQLFIPLDVVRGYKLK--LPSSMTIRDSVGREFEAKCKSWKDG-RIFLTGGWSRLCRWNLAEKNDLCICEFVRGeRNK 247 5789*********999..55569999*******988885.889*******************9988553444 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MWTIEVTKTG REFYFQYGWV KFIEDNTVEF GDFFIFDYDG NGIFDFKLLG KTGCEKKGVG 60 GLKLDVKEEE EEEISVENRK NVQSKAKNWA SDSTSSSSDD DSDEECYMVE EEEEEDEEYE 120 ETEKVPCSIH RYVAVCKARD RHDPLGTDLF RSGRATQPKN PYFVAKIIPK RRNQLFIPLD 180 VVRGYKLKLP SSMTIRDSVG REFEAKCKSW KDGRIFLTGG WSRLCRWNLA EKNDLCICEF 240 VRGERNKGLY LQVQFLHEGA SSHLNEKNIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60140.1	2e-11	B3 family protein