PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU09807.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 344aa    MW: 37699.5 Da    PI: 9.7553
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU09807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.52.7e-1645129186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  v +L+ea++ ++   +r+klk+++We+v+k++     +++  ++++qCk+k+e+++kry+ + +++ +      s++p++ +l+
  PHU09807.1  45 EWSEGAVSCLLEAYEAKWILRNRAKLKGQDWEDVAKHVsaraNSTKSPKTQTQCKNKIESMKKRYRSESATAADA-----SSWPLYPRLD 129
                 5*************************************87777777888999******************99984.....57****9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDKQAGNHHH QNHEISNKDD YSPKIKPQNY QVATGNNSDR LKRDEWSEGA VSCLLEAYEA  60
KWILRNRAKL KGQDWEDVAK HVSARANSTK SPKTQTQCKN KIESMKKRYR SESATAADAS  120
SWPLYPRLDL LLRGNNASAA SFSLIPAPAA VAPPLNCVVD VVEPPQAAIV MPPPPEAPPT  180
SLPPIPPPPP TALPIGNGDQ NSHGSNGLDR GIKEDIMDAK LSDNAAASDH KNATATNSSS  240
TPALYSDNKS KSKLRSKKRK RAVEGWEIGE SIRLLAEVVV RSEQARMETM RDIERMRAEA  300
EAKRGEMDLK RTEIIANTQL EIAKLFASIT KGSVDSSLRI GRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.13e-95Trihelix family protein