PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU09780.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 280aa MW: 30363.7 Da PI: 9.5595

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU09780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.6e-39	23	83	3	63
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 + a++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss PHU09780.1 23 DGAINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRSSS 83 56789****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGAEIGSRPG GEIINKKARP VKDGAINCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW 60 TEGGTLRNVP VGGGSRKNKR SSSSQKLPDL NPNLNSHVPD HQLHQNPNKI NIVGSTSQDL 120 SLGFRTVPHD HQTSFHGVLP QFLELPKMDA SNNHLGSTQI SALELLRTGI ASRGFTSFIS 180 SPSTPDLNAL YSTSGFPFQE LKLSGGNTHD HAASLSNYPS GGSGVQENGG ARIMFPLGGL 240 KQLSSTNEAD HHHHQTKGQE NNNSNAGLYW NGMLGAGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	6e-52	Dof family protein