PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU09618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 34654.7 Da PI: 6.9837 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.7 | 5.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde+lv+ +++ G g+W++ ++ g+ R++k+c++rw +yl PHU09618.1 14 RGPWTPEEDEKLVEFINKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.6 | 3.9e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l PHU09618.1 67 RGPFSPEEQKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MGRTPCCDKN GLTRGPWTPE EDEKLVEFIN KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF SPEEQKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLRKRLLSMG 120 IDPQTHEHHS DPNGLVRRPA TSSLARHLAQ WESARLEAEA RLSRESQFLV PSSVGRSETD 180 YFLRIWNSEI GESFRKFKKG EKSACHSPAS QASSCTKYGS ASGITTEVEI GVAGSPVTGS 240 NQNECMEWKI GQPYTEDFLQ GADTCSSNAM DEDSSESALQ LLLDFPSNND MSFLGHSDSY 300 SLYPFLSESY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-122 | MYB family protein |