PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08996.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 248aa    MW: 28398.8 Da    PI: 6.2487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172271255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +g+WvAeI+  +   ++ r +lg+f++aeeAa+a+++a+  l+g
  PHU08996.1 22 KFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDSAEEAARAYDEAACLLRG 71
                799******.7******99932...36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEQEQVHDST KQWNPKVQKQ RKFVGVRQRP SGKWVAEIKN TTQKIRMWLG TFDSAEEAAR  60
AYDEAACLLR GSNARTNFLN HAPVSPALSM KIRNLLNQKK SLNKMINPKT THKNPTTRTT  120
TTTVSTSASR HQESKIFDDD AYKPDMSCFM TGIDQMGSSN FDHSTTFSTD FDSILLGDEQ  180
VGNFDHEVPK GNNLEDQMPE FEQMKVERQI SASLYAVNGV NEYWENFQDC NDATFWDLPM  240
LYQMFCPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-41ERF family protein