PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08824.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 357aa    MW: 40576.9 Da    PI: 9.837
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.54.8e-1318941399
                TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                s++  +pk f+ ++ +g   ++++  +  ++g++W vkl  ++++    l++GW++F+ +  L+ gD v+F+++g++ef   v++f++
  PHU08824.1 18 SRQKKIPKGFL-KYlKGH--SHIERAILKRTGKKWLVKL--NGRR----LEDGWEKFAGELSLRLGDLVIFRHEGDMEF--EVSIFDS 94
                56678******.564655..567888899**********..8888....************************999999..9999986 PP
2B340.93.7e-13157243697
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ++++ ++ +++ +pk fa+e +++  ++  ++++d + rsW + l    +++++++++ W++F+ an LkegD ++F+  + +++++v+k++
  PHU08824.1 157 VKPYWMSMSMIHVPKLFARESELSG-RKCGIMIRD-EERSWPFSL--FYRGRHTFIGGEWRKFCAANLLKEGDRILFEIFS-NGEKPVLKIY 243
                 56778888899**********6553.333577777.88*******..55555689***********************655.7777899887 PP
3B3444e-14282352578
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 
                 +++s++ +++ l+lp  fa++ g+ + ++ +++l de+ rsW++ l   + ++++ +++GW +F kangL++gD
  PHU08824.1 282 TIKSYSITNSALYLPTAFAKSTGLMS-GGCEIILIDEKHRSWSMWL--GRMDCHFGIRRGWDKFLKANGLQVGD 352
                 5799***************9998875.567****************..*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MCWSFLDKAN GVATCIQSRQ KKIPKGFLKY LKGHSHIERA ILKRTGKKWL VKLNGRRLED  60
GWEKFAGELS LRLGDLVIFR HEGDMEFEVS IFDSSECERE DGAEENNRTP EETSNKFEFK  120
DATGKPKPKI TSQCKAFSDL EAAKDMLLGR PHFISTVKPY WMSMSMIHVP KLFARESELS  180
GRKCGIMIRD EERSWPFSLF YRGRHTFIGG EWRKFCAANL LKEGDRILFE IFSNGEKPVL  240
KIYGNHLKAV AGRRVKTPDV AALKLQVPAS TSADANPHFI STIKSYSITN SALYLPTAFA  300
KSTGLMSGGC EIILIDEKHR SWSMWLGRMD CHFGIRRGWD KFLKANGLQV GDPSLQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.14e-37B3 family protein