PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08819.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 436aa MW: 50027.6 Da PI: 8.4475

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.1	1e-15	147	224	5	86
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++++++l++ l++pk+fa+++ +++ + ++++d + sW++ + y++++++ ++++GW+eF+ n LkegD ++F++d+ PHU08819.1 147 TIRPYSLSKYFLRIPKQFAQDNRLNNGK-CNIIMRD-EQSSWTFSV-YTNGKNS-IIGSGWREFCIMNCLKEGDRLIFSFDS 224 56789999999*********888655.5899999.5679*.5666555.79*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MEKPKPNVMS SHKDFPDVET AKDMPRGRPR FIYTITPSCI SKYFLHVPRQ FARENGLRDR 60 KCIITIRDEQ QRPWLFKLYT ATGNTFIADL RANASLQPEE KKPNLDAIRV FTQGKPKPKI 120 KTSGKASSKV EAAYKDTNLS HSHFICTIRP YSLSKYFLRI PKQFAQDNRL NNGKCNIIMR 180 DEQSSWTFSV YTNGKNSIIG SGWREFCIMN CLKEGDRLIF SFDSVVSINK LDLRESPSLQ 240 AEVKMRILDA ERMSDKGRRL KTSSTTTPES QVAASTSVDV NSHFISTIKP YTIKNSTLYL 300 PLDFAKSNGL MDKSEMILVD EKQRSCIEEE NEVDAVDFDE DDENIGETPE LGNANVRSES 360 VNLPPRPLRA SRARKQTSVE WNFFERISDI EAGICGFPDS FYDLPCWNSV DEGAYTSTHR 420 EELKYYLRSP PEDRRR

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MEKPKPNVMS SHKDFPDVET AKDMPRGRPR FIYTITPSCI SKYFLHVPRQ FARENGLRDR  60
KCIITIRDEQ QRPWLFKLYT ATGNTFIADL RANASLQPEE KKPNLDAIRV FTQGKPKPKI  120
KTSGKASSKV EAAYKDTNLS HSHFICTIRP YSLSKYFLRI PKQFAQDNRL NNGKCNIIMR  180
DEQSSWTFSV YTNGKNSIIG SGWREFCIMN CLKEGDRLIF SFDSVVSINK LDLRESPSLQ  240
AEVKMRILDA ERMSDKGRRL KTSSTTTPES QVAASTSVDV NSHFISTIKP YTIKNSTLYL  300
PLDFAKSNGL MDKSEMILVD EKQRSCIEEE NEVDAVDFDE DDENIGETPE LGNANVRSES  360
VNLPPRPLRA SRARKQTSVE WNFFERISDI EAGICGFPDS FYDLPCWNSV DEGAYTSTHR  420
EELKYYLRSP PEDRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	2e-17	B3 family protein