PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08693.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 513aa    MW: 56766.4 Da    PI: 4.4833
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind55.21.9e-17261252102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHH....HSTT-....-HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpk....yFkhs....nfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgk 90 
                   Fl k+y++++d+++++++sws+++nsfvv+d+ efa+++Lpk     +++      + SF    ++ gF+kv+ ++         weF+++ F +g+
    PHU08693.1  26 FLVKTYDMVDDSSTDKIVSWSATNNSFVVWDPPEFARDLLPKdlcvAYQTPthafTLPSFGVFVDIQGFRKVDPDR---------WEFANEGFLRGQ 113
                   9********************999****************998877555431112456999999999****99998.........************ PP

                   XXXXXXXXXXXX CS
  HSF_DNA-bind  91 kellekikrkks 102
                   k+ll++i r+k 
    PHU08693.1 114 KHLLKSISRRKP 125
                   *********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MESNSSTGAP APTPAPMPSA NAPPPFLVKT YDMVDDSSTD KIVSWSATNN SFVVWDPPEF  60
ARDLLPKDLC VAYQTPTHAF TLPSFGVFVD IQGFRKVDPD RWEFANEGFL RGQKHLLKSI  120
SRRKPAHGHT QQQQQPHGQN ASACVEVGKF GLEEEVERLK RDKNVLMQEL VRLRQQQQTT  180
DNQLQGMVQR LQGMEQRQQQ MMSFLAKAVN SPGFLQQFVQ QQNESNKRIT EGSKKRRIKQ  240
DIVSRDHSVT PADGQIVKYQ PMMNEAAKAM LRELSKLDSS PRLENFSNSP ESFLDGSPPS  300
NASSTRVSGV TLQEVPPTSG QPLLNTVSAI AGQSMSPSTS EIQSSRIGTS PEIANNQFAD  360
ISSLVGSQDL PPCSLPASDI IMPELSQLPE ILPENNIDII GSEMEHDSFM DTAVGVDGKM  420
PLDIGSFSPD PLEWQTGLLD DIQEFPSVVD PFWEKFLQSP SPGETEEMES AVMDDTSNTS  480
ETKPQENGWN KTQNMEQLTE QMGLLTSNNQ KAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234239KKRRIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-107HSF family protein