PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Trihelix | ||||||||
Protein Properties | Length: 179aa MW: 19854.6 Da PI: 9.5799 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 50.4 | 5.8e-16 | 47 | 113 | 2 | 65 |
trihelix 2 WtkqevlaLiearremeerlrrgk..lkkplWeevskkm.rergferspkqCkekwenlnkrykkik 65 W+++ +++Li++r+e+e ++ ++k k+lWe v+ +m +++g++rs +qCk w+nl +ryk ++ PHU08637.1 47 WSNEGIRDLIAIRSELEAEFTSAKrsNLKNLWEIVGVRMnERGGYRRSGEQCKTMWNNLINRYKVLN 113 *********************86522669**********77889********************776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MFSGDNENIG PFTHPLRLLP ARSISVAAAV AVAGIDGLGG DDRVPPWSNE GIRDLIAIRS 60 ELEAEFTSAK RSNLKNLWEI VGVRMNERGG YRRSGEQCKT MWNNLINRYK VLNCYSREVA 120 GKVAVMSPQG DRFKPLEPSL AAMQGKAAYS RPSWSCSSPD PTRRAALCFT EFNEVRKSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 6e-17 | Trihelix family protein |