PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08598.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 493aa    MW: 57068.2 Da    PI: 7.8061
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.13.8e-141695998
                HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                  +k+g l +p  f+++ +g   e+    +  ++g++  vkl  ++++    l++GW++F+++++L+ gD +vF++dg++ef   v++f+
  PHU08598.1 16 PGFKHG-LKIPVGFLKHLEGRG-EKEHAAVLKRDGKKCLVKL--NGQK----LEEGWEQFAEEHDLQLGDLLVFRHDGNMEF--DVSIFN 95
                556666.********6665443.3346889999*********..8888....*************************99999..888875 PP
2B351.81.5e-16142225592
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 +++ ++l++g l++p+kfa+++g+++ ++  l+++de+ rsW++++    + +++++++ W eF  an++k+gD ++F+++++ ++++
  PHU08598.1 142 TIKQYSLRNGYLRIPNKFAKANGLIN-KDCGLIIRDERQRSWNLRI--YTSCSQVYMGGRWGEFRAANDIKAGDQIMFEVVSN-GEQP 225
                 568999****************7774.4557***************..88888999***********************8875.3334 PP
3B354.71.8e-17268359499
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +++ ++l++g l++p kfa+e+g+ ++ +  l+++de+ rsW++++    +  ++ +++ W++F+ an++k+gD ++F+++  s+ ++v k+++k
  PHU08598.1 268 CTIKQYYLTNGYLRIPSKFAKENGLTNK-ECGLIIRDERQRSWNLRM--YTSCHHVCIGGRWRKFCVANDIKVGDQIMFEVVT-SGVQPVWKFHDK 359
                 5678999****************76643.346999************..9999999************************765.777777777665 PP
4B338.91.5e-12391472590
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 +++++ l+ g l+lpk+ a ++g+++++  +l+++de  rsW++ l  r  + ++ +++GW eF +a  LkegD ++F+++ + ++
  PHU08598.1 391 TIKPYCLTYGYLCLPKEIALRNGLISKK-CDLIIRDECQRSWNLIL--RPFGTSVCIRGGWDEFRDAYCLKEGDHIMFEVVTD-GE 472
                 578999999*************999755.59***************..*******************************8764.33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MKVPPVKPHF FKPVLPGFKH GLKIPVGFLK HLEGRGEKEH AAVLKRDGKK CLVKLNGQKL  60
EEGWEQFAEE HDLQLGDLLV FRHDGNMEFD VSIFNLSHYD REYAEYLLEE EEAHTIEATS  120
KIFESKEAAT HNPVGRSQFI CTIKQYSLRN GYLRIPNKFA KANGLINKDC GLIIRDERQR  180
SWNLRIYTSC SQVYMGGRWG EFRAANDIKA GDQIMFEVVS NGEQPVWKFH EYFQQEEKEA  240
HTFEETSQKF ELKEAAPHNL FGESQFVCTI KQYYLTNGYL RIPSKFAKEN GLTNKECGLI  300
IRDERQRSWN LRMYTSCHHV CIGGRWRKFC VANDIKVGDQ IMFEVVTSGV QPVWKFHDKP  360
NPSIESSRKA FPHVEEAAAH KPSGHSRFVC TIKPYCLTYG YLCLPKEIAL RNGLISKKCD  420
LIIRDECQRS WNLILRPFGT SVCIRGGWDE FRDAYCLKEG DHIMFEVVTD GETPIWKFHG  480
KVSDEIVRSI IEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.17e-46B3 family protein