PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08580.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 287aa MW: 32704.2 Da PI: 9.3849

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	11	94	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 fk ++k+g + +p f ++ +g+++ + + + g++W vk+ +++ +l++GW +Fv++++L+ gD+++F+++g +ef v+vf++ PHU08580.1 11 FKPI--LPNFKHG-IKIPIAFSKHLKGINQ---ERAILRRAGKKWCVKV--NGR----LLGEGWAKFVEEHDLQLGDVLIFRHEGAMEF--EVSVFDS 94 5666..5677777.99***966655533...4566788*****..555....6*********************9999999..9999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MKIAPMKPHF FKPILPNFKH GIKIPIAFSK HLKGINQERA ILRRAGKKWC VKVNGRLLGE 60 GWAKFVEEHD LQLGDVLIFR HEGAMEFEVS VFDSNQFERK YEHTAEGVNE AGEEINHTCK 120 KFTSQAKTTK KPKLDSKSPH EVFPKVEAED NMPLGRPHFI YTITPYFLSR DNFFGKYLDL 180 PEDKNARLQM KMAYELLKYR FMYENKDKMD EVWINYCGMP GGLVIVDGLS GDGAVSGGSS 240 AAVVLMMLLL QYLKQTIMSM IILVIQISPL SANVLQVNVK TIGQNMM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31640.1	5e-24	B3 family protein