PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30550.8 Da PI: 5.3713 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.4e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l++ ++ G+g +W + +++ g++R++k+c++rw++yl PHU08157.1 14 RGPWSPEEDNILKNFLEKNGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 9e-15 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd +++++ +q G++ W+ Ia+ ++ gRt++++k++w++ PHU08157.1 69 GGFTEEEDNIILNLYNQIGSR-WSVIAANLQ-GRTDNDVKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRAPCCDKT KVKRGPWSPE EDNILKNFLE KNGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIL NLYNQIGSRW SVIAANLQGR TDNDVKNYWN TKLKKKLLAS 120 QNTNIISTNN NINSSDFNHI NYSRNYYGTL DYSNTFTSHM DPNLTNYSNN CDQCPLLPSL 180 VEIQENDATI QSSESCQILQ KCATLKESDT HPSTFLQNPN NIGYNYYDDI LENGFDFQEN 240 AIGGANPNSS YYNNILEIDD QLFKGFEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 5e-73 | MYB family protein |