PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07601.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Nin-like
Protein Properties Length: 290aa    MW: 32275.2 Da    PI: 9.7552
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK63.73.1e-202875350
      RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                k++s++++sk F+lp+ dAA++Lgvc++vLK+iC ++G+ RWP+Rk+ 
  PHU07601.1 28 KSVSFDEVSKLFNLPLSDAAQSLGVCASVLKKICYENGLVRWPYRKVI 75
                789*******************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MNNLQGLGPI SYPIHNPNPN PRPNTDPKSV SFDEVSKLFN LPLSDAAQSL GVCASVLKKI  60
CYENGLVRWP YRKVISGKSI EDIKKEALRE KQERSMDFPK AAGERNDSLA SSAILSFSGS  120
PLPNRSITST MEMSKAGAFS QQQGARNFQS GSLPHFRISN LPKGTSVSND EFKYGFPSDG  180
LSTTTYRWWG NKSPDHNEDS KLNDDNAKNN TEQPENITEK SECQTSVDSR GTTLLTDVRK  240
RAVKEGKETL KLGVYRGRSA TMLDSTKRKI LHQVFKSYFR VHGDMSKCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.15e-10Nin-like family protein