PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07498.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 286aa MW: 32894.9 Da PI: 4.7052

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.5	4.2e-08	105	148	48	91
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 + + +++++r++C a+++ ++++dg v+k+ leHnHel p PHU07498.1 105 AGPVKARNQSKRIDCIARVNCQMMNDGSCIVIKVILEHNHELEP 148 455677999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MDHNECNTQL RATLYGLFGL EDSDSLHGNE DSYGGYTEGP DRYLDTDDKD LQNLDGEEMN 60 RSHQSTEDED LSVFDSKEDH YWEDDVEEEK GPMHDDSYTE EHYTAGPVKA RNQSKRIDCI 120 ARVNCQMMND GSCIVIKVIL EHNHELEPAM SHFCPSHREL SKTVKRSLVT HDITSLRPSK 180 SIRLLEVEAG GLEIMRTWLM AMGEIPLTTI LTDQCESIKA AIHEVMPNTV HRYCIWHIFT 240 KLLAMLRGLT NYKPAKARFK AIIFDSIKVS EFEDKWKAFV EEYDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	4e-14	FAR1 family protein