PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07290.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 383aa MW: 42271.7 Da PI: 4.344

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.2e-14	312	358	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ PHU07290.1 312 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 358 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MLQTVFCIPL LDGVLELGTT ERVQEDIEFI LHIKGFFIEQ QQPQPPKPAL SEHSTSNPTT 60 FSEPHVYSGN TPSPANIALA DRDGRIAGEE EDVEKDEDED DNEAELDSDS IAIQSGVGRA 120 EACELMELDM SEAIRLGSPD DGSNNMDSDF NLVGAGQAGN TTESFKAETA ISWANFQDIQ 180 HLPGVPSYDE LAQEDTHYSQ TVSAVLEHPS NTSSIIGCIS PNSAQSAFTL WRTDCTRPDP 240 LLDRGGGSQW LLKNILFTVP FLHTNLYQAE EAASRKSQDV LTTADSSAAS TASRFRNGCT 300 ITITHQEEPS GNHVLAERRR REKLNERFII LRSLVPFVTK MDKASILGDT IEYVKQLRKR 360 VQDLETRARH NDATKDAGIF FDA

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MLQTVFCIPL LDGVLELGTT ERVQEDIEFI LHIKGFFIEQ QQPQPPKPAL SEHSTSNPTT  60
FSEPHVYSGN TPSPANIALA DRDGRIAGEE EDVEKDEDED DNEAELDSDS IAIQSGVGRA  120
EACELMELDM SEAIRLGSPD DGSNNMDSDF NLVGAGQAGN TTESFKAETA ISWANFQDIQ  180
HLPGVPSYDE LAQEDTHYSQ TVSAVLEHPS NTSSIIGCIS PNSAQSAFTL WRTDCTRPDP  240
LLDRGGGSQW LLKNILFTVP FLHTNLYQAE EAASRKSQDV LTTADSSAAS TASRFRNGCT  300
ITITHQEEPS GNHVLAERRR REKLNERFII LRSLVPFVTK MDKASILGDT IEYVKQLRKR  360
VQDLETRARH NDATKDAGIF FDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	322	ERRRRE
2	318	323	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	4e-32	bHLH family protein