PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 451aa MW: 50101.3 Da PI: 7.1598 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.4e-17 | 59 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd+ l++av + g++Wk+Ia+ ++ R++ qc +rwqk+l PHU06844.1 59 RGGWTPEEDDTLKKAVSVYRGKCWKKIAELFP-DRSEVQCLHRWQKVL 105 789*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.6e-18 | 111 | 157 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++++++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l PHU06844.1 111 KGPWTREEDDKIIELVAKYGPIKWSVIAKSLP-GRIGKQCRERWHNHL 157 79******************99**********.*************97 PP | |||||||
3 | Myb_DNA-binding | 49.9 | 7.2e-16 | 163 | 206 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE+ l+da++ +G++ W+ Ia+ ++ gR ++ +k++w++ PHU06844.1 163 KDAWTLEEERALIDAHRIHGNK-WAEIAKVLP-GRADNGIKNHWNS 206 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence |
MDELQVEECC IENKQSVAAS SSSVSENSGS VNLRSPAVSS PTPVSPTHRK TTGPIRRARG 60 GWTPEEDDTL KKAVSVYRGK CWKKIAELFP DRSEVQCLHR WQKVLNPELV KGPWTREEDD 120 KIIELVAKYG PIKWSVIAKS LPGRIGKQCR ERWHNHLNPN IKKDAWTLEE ERALIDAHRI 180 HGNKWAEIAK VLPGRADNGI KNHWNSSLRK KLDFYLATGN LPSVKSEELL VCSIKTSEAA 240 DVVSSGAIDI CKIENGWQVT EINGGPQAES TDSEIVRLEA QSPEEDAIQH IKQSTESENR 300 CNGWNIDSAV GRLQVFEAPF PCEISTCGRL YYEPPRSESC IPLDSDLLNI GWAQCASDAS 360 PSPSPNGFFT PPSTKDHSLY AQTPESVLRT AARSFNTPSI LRKRKSQGKL STPTNKMRKS 420 DGDFCKDKLI DACDKVQFDS SDKSSMDNGV S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 402 | 428 | RKRKSQGKLSTPTNKMRKSDGDFCKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 1e-121 | MYB family protein |