PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06808.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 398aa MW: 42345.3 Da PI: 9.5703

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	81	140	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprCdstntkfCy+nnyslsqPr+fCkaC+ryWt+GGalrnvPvGgg+r+nk+ss PHU06808.1 81 EAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACKRYWTRGGALRNVPVGGGCRRNKRSS 140 7789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MNFSSIPYLD PANWQQQGGG SIQNHHHHQL TSPPSQTAPP PQVPPPPPVP LQPHGGGGGA 60 GTIRPGSMAD RARMANIPMP EAALKCPRCD STNTKFCYFN NYSLSQPRHF CKACKRYWTR 120 GGALRNVPVG GGCRRNKRSS NSKSGNNNNN NNNSKSPASS TSTDGRQATN NSGSTSTISS 180 HSNSFTGPTS AASLLGLMTP QIPPLRFMSP LGQFSSDHHH HHHHFTPSNH MNLNFSTSTC 240 GNILGGTTEG MMVNTNNNLL GVXGAGVGGV ASLLSSGNLE HWRMPQQFPN FLGGFDPSNS 300 PSSGVSNYPF QGGVHEAVQF LGGESTSQIS RPKISTSMLN QMASVKMEDS NNNNNNQDQS 360 ALSRQLLGIQ GNNENWNTAS AWSDLSASFS SSSTSNAL

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MNFSSIPYLD PANWQQQGGG SIQNHHHHQL TSPPSQTAPP PQVPPPPPVP LQPHGGGGGA  60
GTIRPGSMAD RARMANIPMP EAALKCPRCD STNTKFCYFN NYSLSQPRHF CKACKRYWTR  120
GGALRNVPVG GGCRRNKRSS NSKSGNNNNN NNNSKSPASS TSTDGRQATN NSGSTSTISS  180
HSNSFTGPTS AASLLGLMTP QIPPLRFMSP LGQFSSDHHH HHHHFTPSNH MNLNFSTSTC  240
GNILGGTTEG MMVNTNNNLL GVXGAGVGGV ASLLSSGNLE HWRMPQQFPN FLGGFDPSNS  300
PSSGVSNYPF QGGVHEAVQF LGGESTSQIS RPKISTSMLN QMASVKMEDS NNNNNNQDQS  360
ALSRQLLGIQ GNNENWNTAS AWSDLSASFS SSSTSNAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	3e-43	Dof family protein