PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 206aa MW: 24193 Da PI: 5.6989 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.6 | 7.8e-15 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W eEde+l+ +v lG ++W++ a+ g++R++k+c++rw +yl PHU06462.1 8 KGPWLDEEDERLAFVVSILGERHWDALAKASGLRRSGKSCRLRWMNYL 55 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.2e-17 | 63 | 106 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T++E+ l++++ kqlG++ W++Ia+ ++ gRt++++k++w+++l PHU06462.1 63 QITEDEENLIIKLQKQLGNK-WSKIAKQLP-GRTDNEIKNYWRSHL 106 569*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MQEEKLRKGP WLDEEDERLA FVVSILGERH WDALAKASGL RRSGKSCRLR WMNYLRPNLK 60 HGQITEDEEN LIIKLQKQLG NKWSKIAKQL PGRTDNEIKN YWRSHLRKKA LIYEQECFGS 120 NNTSGDSQPK LSFAKDDNCQ SFDDGEEESS RLLDWMIPSW TYEQSQMEHH MYLCKILNLC 180 SCNYSSQDEN ISSTWDDASS SSIWEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 2e-52 | MYB family protein |