PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06372.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 471aa MW: 52741.8 Da PI: 4.4956

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.5	1.2e-34	74	166	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d+ l+++i ws+ng+sfvv+d+ ef++ vLp+ Fkhsnf+SFvRQLn+YgF+k++ ++ weF+++ F +gkk+ll++i+ PHU06372.1 74 FLSKTFDLVDDPLLDSVIGWSNNGESFVVWDPVEFSRLVLPRNFKHSNFSSFVRQLNTYGFRKIDADK---------WEFANEGFLRGKKHLLKNIQ 161 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+ks+ PHU06372.1 162 RRKSH 166 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MNPFDKNQES NTSTNTLPFS TEMEFEFAAF PLPSADPLIS FESFSNPLSQ STKEEVLSVP 60 QPMECLHGTQ IPPFLSKTFD LVDDPLLDSV IGWSNNGESF VVWDPVEFSR LVLPRNFKHS 120 NFSSFVRQLN TYGFRKIDAD KWEFANEGFL RGKKHLLKNI QRRKSHQAGS SLGSSAEAGK 180 ATVDEIEKLK KERSLMMQEV VELQQQQRGT VQQMESVNEK LVAAEQKQKQ MVSFLAKVFQ 240 NPTFFGCIRQ MKEQGEITSS RTMRKFIKHQ PHDSSREESS MEGQIVKYRP DFQDLATSFE 300 SPPFNPVVDQ QLPETVASEG LTTAHGFLKN PDRIIEGASG FNPDGSHFKG KNVVSPQLEV 360 MPEYFSFPEE LEEERNVSGF SPGIESMMKE EEVWSMGFEA SAGMSSTGTE LWGGLGNYVP 420 DFGVSSGLSD LWDLDPLLAA GGSGVDKWPD DESPFGQSEN QVNQPKSDDS F

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MNPFDKNQES NTSTNTLPFS TEMEFEFAAF PLPSADPLIS FESFSNPLSQ STKEEVLSVP  60
QPMECLHGTQ IPPFLSKTFD LVDDPLLDSV IGWSNNGESF VVWDPVEFSR LVLPRNFKHS  120
NFSSFVRQLN TYGFRKIDAD KWEFANEGFL RGKKHLLKNI QRRKSHQAGS SLGSSAEAGK  180
ATVDEIEKLK KERSLMMQEV VELQQQQRGT VQQMESVNEK LVAAEQKQKQ MVSFLAKVFQ  240
NPTFFGCIRQ MKEQGEITSS RTMRKFIKHQ PHDSSREESS MEGQIVKYRP DFQDLATSFE  300
SPPFNPVVDQ QLPETVASEG LTTAHGFLKN PDRIIEGASG FNPDGSHFKG KNVVSPQLEV  360
MPEYFSFPEE LEEERNVSGF SPGIESMMKE EEVWSMGFEA SAGMSSTGTE LWGGLGNYVP  420
DFGVSSGLSD LWDLDPLLAA GGSGVDKWPD DESPFGQSEN QVNQPKSDDS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	3e-86	HSF family protein