PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 355aa MW: 39077.8 Da PI: 6.1921 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.2 | 1.6e-09 | 198 | 245 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a++L + +++++sLq PHU06071.1 198 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 245 8*************************9....89999***************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MGEIPTDFNS FDEEILPITS EPGSSFTALL GLPANQAVEL LVQTPETDNK IESDKINVPY 60 YHYPPPALGP TPTPIPIFPS DIALIDRASK FSVFATTAGG GGNGVGNSPE SNSTLSNSGS 120 KALLVKQEPM DSEFNQNSSP ASSVPMGDRK SMKRKEREKK VKETTKKGKK SANDTSEEGA 180 EKLPYVHVRA RRGQATDSHS LAERARREKI NARMKLLQEL VPGCNKISGT AMVLDEIINH 240 VQSLQRQVEF LSMRLAAVNP RVDFNLDNLF AAERSGSHVE SNLPDMVVPP IWTEGQTSGN 300 RNHYQHLWHF EGFHQPVWGR LEDNSSFVTP ENSLLTYDSS ANSASLHPNQ LKMEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57800.2 | 5e-77 | bHLH family protein |