PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05970.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 526aa MW: 59533.6 Da PI: 9.9717

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	94.5	1.2e-29	2	86	9	102
HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102 ++ed++++++isw+++g++f+v ++ efa+++Lp+ Fkh nf+SFvRQLn+YgF+k+ +++ weF+++ F++g+k+ll++i+rkk PHU05970.1 2 LVEDPATDDIISWNSDGSAFIVRQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKIATSR---------WEFSNDLFRRGDKDLLCDIRRKKA 86 799*****************************************************999.........*******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MLVEDPATDD IISWNSDGSA FIVRQPAEFA RDLLPTLFKH CNFSSFVRQL NTYGFRKIAT 60 SRWEFSNDLF RRGDKDLLCD IRRKKAWTNK QQPNKNNKKE TDNEDQRSSS STSSSSSLEY 120 NSLIDENKRL KKENGALSSE LSSINKKCKE LIDIVSMLAE NSEKQEEEKE GQIKALAGNS 180 HSSRHVKDTV GASLRIRQHA LQGMGTLYRK GTRSMSDLVV AHVDESVTVQ ELKLFTRLFY 240 RSKMASKCDI VFVFQSESSL FDNVIVEENA SFLKIIHGYS ERFLNISSKE TNSKSTNNNT 300 PQSTNFDVSP FLITNKNANA SEEPEPIWGR KKLVNFSVND STESSTRLSY GSVVGFYADE 360 LDPEGTLPGF MDHVPMSLRR WACYPLLLGR IRRNFKHTVL VDVKEMLLLD DPLSRVAKNL 420 THDSVVVNLT KTRSTQKRKA SPSIIMGGSR GIRRLSNAML IEIIRGSSTQ PNKKKKKKMN 480 LVNELTLFNQ LVRNEFILKN VDVIFTELAS REAKDSSVQA KSASLI

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MLVEDPATDD IISWNSDGSA FIVRQPAEFA RDLLPTLFKH CNFSSFVRQL NTYGFRKIAT  60
SRWEFSNDLF RRGDKDLLCD IRRKKAWTNK QQPNKNNKKE TDNEDQRSSS STSSSSSLEY  120
NSLIDENKRL KKENGALSSE LSSINKKCKE LIDIVSMLAE NSEKQEEEKE GQIKALAGNS  180
HSSRHVKDTV GASLRIRQHA LQGMGTLYRK GTRSMSDLVV AHVDESVTVQ ELKLFTRLFY  240
RSKMASKCDI VFVFQSESSL FDNVIVEENA SFLKIIHGYS ERFLNISSKE TNSKSTNNNT  300
PQSTNFDVSP FLITNKNANA SEEPEPIWGR KKLVNFSVND STESSTRLSY GSVVGFYADE  360
LDPEGTLPGF MDHVPMSLRR WACYPLLLGR IRRNFKHTVL VDVKEMLLLD DPLSRVAKNL  420
THDSVVVNLT KTRSTQKRKA SPSIIMGGSR GIRRLSNAML IEIIRGSSTQ PNKKKKKKMN  480
LVNELTLFNQ LVRNEFILKN VDVIFTELAS REAKDSSVQA KSASLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41690.1	3e-51	HSF family protein