PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU05927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28447.1 Da PI: 5.9174 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.6 | 2.7e-14 | 77 | 129 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN ++ Lr+llP + ++ kKls +++ k +YI +Lq PHU05927.1 77 KKLNHNASERDRRKKINGLYSSLRSLLPAS--EHTKKLSIPATVSKILKYIPELQ 129 6789*************************7..37777***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MLAISPSSPL FSVNNNCEWL LEDLISYELN TINGENSNSD IAINSSSQKS LQHCDSIKFD 60 HQIINGGDHN QSDQTVKKLN HNASERDRRK KINGLYSSLR SLLPASEHTK KLSIPATVSK 120 ILKYIPELQN EVERLIQKKE EFTSTNVSNR EKSDDFNKQK RIIRGGIENS SLVISASEIG 180 NKEIVMQIST LKNNKGSIGE AISILEDEGL VLLNATSFET FEDRVFHTLH FQAEGTMVVE 240 VDMLRDKLSI LFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 2e-44 | bHLH family protein |