PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05812.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 309aa    MW: 34762.5 Da    PI: 6.8045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-192978255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  PHU05812.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDNYKRNPLK PWKKGPARGK GGPQNALCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPD AYLNLPHMRA NFNPLNKSQK FKWFSSNNNS FLSSLIPNST  120
GLLNLSAQPS VHVIHQRLQE LKRTEAAAAA AAALSTSSSV SDPKNDQVLP KYSTLPQVNK  180
EKEDVFSPHN KATVRDDHVE KPQIDLNEFL QQIGILKRDD HHHQQQQPDE SRDHDDHNSI  240
SSFAESGVSL KDDSSIAHLF GDTASYNWDT LGAMTGIEDH EAATAEASSF VDAYNVNDEL  300
MFPSSIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.13e-55ERF family protein