PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU05712.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 352aa MW: 40147.2 Da PI: 7.6632 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.3e-17 | 79 | 126 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl PHU05712.1 79 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYL 126 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.6e-14 | 132 | 177 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l PHU05712.1 132 RGNFTPHEEGMIIHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 177 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MNELIKNHLL LLFLSSNHLP LFKHLSICAS SFSFQLSIHT SKTLHTKTTT TTTTPPPPXX 60 XXKQTMGRPP CCDKIGIKKG PWTPEEDIIL VSYIQEHGPG NWRSVPTNTG LMRCSKSCRL 120 RWTNYLRPGI KRGNFTPHEE GMIIHLQALL GNKWAAIASY LPQRTDNDIK NYWNTHLKKK 180 LKKLQTELDS HNLAPLLPNN NNNNINYDNH HQFSWQLSVN NNDKQGISSN SSSSSLYASS 240 TENISRLLEG WMRSSPNNPS RRNNIDHDHD DEMLHVAQKN DQDQEIVKST CEENENSWII 300 PKEKSSNCES NGVVVVDHGK TSPPPFTYLE KWLLEENGGQ VEELMELPMI FT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 4e-89 | MYB family protein |