PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05245.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 311aa MW: 33650.4 Da PI: 5.3119

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	284	307	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C+ C+++F + L++H + H PHU05245.1 284 FACKTCNRTFGSENALESHSKAkH 307 78*****************88777 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MTSFLRGVPK LKMSLILDRR EYCYLAQYCF VIASGTMHFS SGSLFFITGM AESAEVKSGQ 60 PLSVQPGDDM ILHLSQASLG EVKKDKGSEP VCLFVTIDGK KLVLGTLSTD KLPQQQFDLI 120 FDRDFELSHN WKNGRSDEEI PLTIANNGKP EAKASAKDSA PAKQKVTVVE PSKGAKVDDS 180 DESSDDDLSD DEDDSEMGED DSDEDQSDES EEETPEKAET SKKRPADSAA KAPVLDKKKT 240 KFTTPQKTDG KKGAVHVSTP HPSKQAGKTP GNKPNQTPKS GGSFACKTCN RTFGSENALE 300 SHSKAKHSAG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44750.2	5e-23	C2H2 family protein