PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05212.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 207aa    MW: 23128 Da    PI: 6.5044
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind194.41.3e-5998207192301
   GAGA_bind 192 ksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWA 290
                  + d +ln+++ Des++PvPvCsCtG+++  Yk G GGWqSaCCtttiS+yPLP+ +++r  R++grKmS+g f+kl ++Laa+Gydls p+DLkdhWA
  PHU05212.1  98 GKDDWGLNQINCDESAMPVPVCSCTGTPQLFYKSGHGGWQSACCTTTISMYPLPQISNKRYFRVGGRKMSGGGFSKLFNRLAAQGYDLSIPLDLKDHWA 196
                 566889********************************************************************************************* PP

   GAGA_bind 291 kHGtnkfvtir 301
                 k  tn++ t++
  PHU05212.1 197 KRDTNRYNTLK 207
                 *******9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MVMLRRDATL AERNALIQER DDAIIALQLQ DSSTNNDNMV PDSPENGTES DAKHIYGQQQ  60
ILRTLAEAII VIATTTYDWA ILHEIDSDKK GYTQLTSGKD DWGLNQINCD ESAMPVPVCS  120
CTGTPQLFYK SGHGGWQSAC CTTTISMYPL PQISNKRYFR VGGRKMSGGG FSKLFNRLAA  180
QGYDLSIPLD LKDHWAKRDT NRYNTLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162170GGRKMSGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.19e-52BBR-BPC family protein