PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05108.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 194aa    MW: 21607.4 Da    PI: 9.2444
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.3e-055375123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H+++H
  PHU05108.1 53 YTCTFCKREFKSAQALGGHMNVH 75
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEKSSNKYFK HQTMKDFTTT TTNKNVKEYS WDNSNCGDEG DLVGGFLWPP RSYTCTFCKR  60
EFKSAQALGG HMNVHRRDRA RLRLQSLSDT IPNPNPNPSC VSSPSSPSRK FFPPFVPTLP  120
PLLSPTSFSS STTGVSHGMK NGDLTKMGSA KFEKNGKECS EVVKKGEFLR LDLGIGLISE  180
SKDDLDLELR LGYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.14e-32C2H2 family protein