PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU05094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | FAR1 | ||||||||
Protein Properties | Length: 166aa MW: 18768.3 Da PI: 5.2719 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 38.6 | 3.5e-12 | 37 | 81 | 1 | 45 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45 ++YneYA ++GFsvrk++ +ksk +g it+r+f+C+ke +r ++k PHU05094.1 37 NYYNEYAANIGFSVRKEYVNKSKAHGYITSRRFTCYKESYRGKDK 81 69************************************9998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MVDSMKTVSL NGHNDTSHSC EPIKLGMKFD SDEDGFNYYN EYAANIGFSV RKEYVNKSKA 60 HGYITSRRFT CYKESYRGKD KFGPPELDFV TVRWSFWGLR IEVLVGVIVD VAEVHLPLLL 120 LFEAVRSFGW VESGFCILYA GASGGEGMGR VMDDLRWVDG WVVGPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 6e-12 | FAR1 family protein |