PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05089.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 326aa    MW: 37261.4 Da    PI: 5.9334
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000642042241030
                 HHHHHHHHHHHHHHHCTSCCC CS
         HLH  10 rrRRdriNsafeeLrellPka 30 
                 rrR +r+ s +++L ++lP+ 
  PHU05089.1 204 RRRCSRLSSEIQKLAKILPTY 224
                 9******************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MVPTDYSSIA TDNMAPKKKE IESILSKRTS AVAQLYLPLY ELALQALSQS GAEDNEHGEK  60
ESFKRDDPNS NSPSAKELVK TFNIDHYPVR IQCDGATNLM DDLVVKENCF GQYLDLSEDN  120
NARFQMKMVY DLLNHRYCQH QPKVTQNEDC LINIIKGFNI SAGLPWHLVD KVYIPINCGD  180
EFHWVLAVVI LKERRIRVYD SMSRRRCSRL SSEIQKLAKI LPTYLDMSGL LDQKVRTDWS  240
TIEAYRDKMD NLFDVQYVDG IAQQTIGSLD CGPFVAAYAE YVSDVLQVPN DGLDAGLLHK  300
RYDALLWKYR EAKAQKAYAT NVKDPR