PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04811.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 452aa MW: 51765 Da PI: 4.31

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.7	7e-19	70	127	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ng..kr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p+ g k+ kr +lg+f ta eAa a+++a+k ++g PHU04811.1 70 TYRGVRQRT-WGKWVAEIREPVYfSGeyKStgKRLWLGTFSTASEAAIAYDEAAKVMYG 127 69**999.******777788996679*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MYMSSHIQRK QKRRRNGSNS IEEILLRWKI FYQDVNCIDD QVNKKRRIRV KGSTKGCMRG 60 KGGPENSGCT YRGVRQRTWG KWVAEIREPV YFSGEYKSTG KRLWLGTFST ASEAAIAYDE 120 AAKVMYGSNA ILNFPNYCDL SSKTSSLELS GKSSDDHGDL GVDETQNIEI ESGLKTSDTL 180 DDGVVVNTDL GNCANIDEIS EIHQECCKGN QGSPTCCLTE EELEVIPEEN SEIEVNDECN 240 SGICSTSQNS CVKVETPIVE EMENDEFVHN KDLERLNFND VLNSLLEDKT DVRPTLMFSK 300 DVLRTDEICN STDQIVRQEM DKYSYSMNIS EEQPLDFRSS ENRREDFSNH IKYMERCLME 360 DSSPMEATTI SDAFCLTESY KEAYSFQRFL EESFELNYAE TEEQFDCTYD QQINLQNSET 420 RSQIRSDGII SNQADWKEQN LDVFGLDDRS RQ

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MYMSSHIQRK QKRRRNGSNS IEEILLRWKI FYQDVNCIDD QVNKKRRIRV KGSTKGCMRG  60
KGGPENSGCT YRGVRQRTWG KWVAEIREPV YFSGEYKSTG KRLWLGTFST ASEAAIAYDE  120
AAKVMYGSNA ILNFPNYCDL SSKTSSLELS GKSSDDHGDL GVDETQNIEI ESGLKTSDTL  180
DDGVVVNTDL GNCANIDEIS EIHQECCKGN QGSPTCCLTE EELEVIPEEN SEIEVNDECN  240
SGICSTSQNS CVKVETPIVE EMENDEFVHN KDLERLNFND VLNSLLEDKT DVRPTLMFSK  300
DVLRTDEICN STDQIVRQEM DKYSYSMNIS EEQPLDFRSS ENRREDFSNH IKYMERCLME  360
DSSPMEATTI SDAFCLTESY KEAYSFQRFL EESFELNYAE TEEQFDCTYD QQINLQNSET  420
RSQIRSDGII SNQADWKEQN LDVFGLDDRS RQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	15	QRKQKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	8e-33	ERF family protein