PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04774.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 411aa    MW: 46874.2 Da    PI: 7.2627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20208257255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  PHU04774.1 208 RYRGVRQRP-WGKWAAEIRDPY----KaTRVWLGTFDTAEAAASAYDEAALRFRG 257
                 7********.**********76....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MVRACDEGGT DVLIRRYERL ALDDFRWGRG RPKKYWKGVI RRNMEQLQLT EDMTLDRKVA  60
NSRDFISSSS SSSRNVFETM FWGNINREEE MSVMVSALTH VVVGQDHRVV NPLQEQTEKI  120
GGADHNDNLF SWGVGEKRRR EEEQMQQFLH GNHSSHDMRS SGDESTSIRT ITSSTPTTEA  180
TFIYTTSIHH DNQNSSSDQS NNNQPRRRYR GVRQRPWGKW AAEIRDPYKA TRVWLGTFDT  240
AEAAASAYDE AALRFRGSKA KLNFPENVRL LPSSIQQPPN NTLYSVSSSP EPIVHTSSQH  300
RSNFTGHPSR DEDPIVHTSS MYRSNFTGYS SRDEEPIGYI SSPYHSNFIH HTSRDEPIIH  360
TTSDHRVQQG AYFPLVHFQA GNTSQSTSGS DFHQAATFNW SNYDHHPSSS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.13e-21ERF family protein