PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04708.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family SRS
Protein Properties Length: 264aa    MW: 29833.7 Da    PI: 8.3914
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702164.56.3e-51171445154
      DUF702   5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103
                   +CqdCGnqakkdC + RCRtCCksr ++C+thvkstW+p++ rr r+  l++         ++ ++kr re+  ++ +al +t+            +
  PHU04708.1  17 YRRCQDCGNQAKKDCPFLRCRTCCKSRRYQCQTHVKSTWIPVSTRRPRH--LSTI--------QQPNPKRYREN--QNPAALLQTE----------GEE 93 
                 568********************************************83..3332........34456777765..3344443333..........346 PP

      DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                 +lP+evs +avfrcvrvss+d+  +++aYqt+v+i+GhvfkGiLydqG+++
  PHU04708.1  94 ELPAEVSLPAVFRCVRVSSLDNLVDQYAYQTSVNIAGHVFKGILYDQGPDD 144
                 7************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MMRSEDDQGI TISSSNYRRC QDCGNQAKKD CPFLRCRTCC KSRRYQCQTH VKSTWIPVST  60
RRPRHLSTIQ QPNPKRYREN QNPAALLQTE GEEELPAEVS LPAVFRCVRV SSLDNLVDQY  120
AYQTSVNIAG HVFKGILYDQ GPDDDDNIPK ETSSRGFHQH LLTTNLTKPS TSYPTPFTNF  180
MPGTTVSHVS DLVGPDGVVY AVEFSHRSGR DLANMAKKRT NVIPIIEDAR HPAKYRMLVG  240
MVDVIFSDVA QPDQVRPFMA INVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.13e-49SRS family protein