PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU04671.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SBP | ||||||||
Protein Properties | Length: 299aa MW: 33761 Da PI: 8.5793 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.2 | 8.9e-42 | 168 | 245 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ PHU04671.1 168 RCQVEGCSADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKNQQ 245 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MLDYDWGEQS SVMLSGNEPN EENDQHRQFF DPYANTQSFT ENPSSLMNPH QQFPTIQQQN 60 HQFFQTQNNP HLTTTSLYDP RVYETCFTHS QGNSIPSVLQ PNSSFMVVPK SEPQFVSAGG 120 IDFGSSSSSR IGLNLGGRTY FSSSEDDFVN RLYRRTRAVE AGSVNTPRCQ VEGCSADLTH 180 AKHYHRRHKV CEFHSKASTV IAAGLTQRFC QQCSRFHLLS EFDNGKRSCR KRLADHNRRR 240 RKNQQANLEN SSKSQLESTR NSSSDSLARS PPDSGAHSSS VTVAISSPRI SLDCFRQRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 1e-83 | SBP family protein |