PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04638.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 824aa MW: 91106.7 Da PI: 8.0504

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.7e-18	322	422	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l+++ PHU04638.1 322 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKLLMG 418 99************************555567778***********99899999999.*******************876.88888888 PP EE-S CS B3 96 vfrk 99 ++++ PHU04638.1 419 FRKA 422 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 824 aa Download sequence
MESKICMNGV CGATCSIEWK KGWPLKSGEF ASLCDKCGTA YEQLVFCDLF HSEDTGWREC 60 ISCGKRLHCG CIASCSLLEL LDSGGINCVS CVRSCQRHAT PNHEKPKAFG ASISNSVGET 120 ASTSLGSQMN GSEPNKREGS DSIDPALLLP HQNENTNRPV GQIKMEEAFH PAGESGSTFS 180 SNLCQAAAES SKNAKLDSYI GYKGVTNIHG SMVQTNLSIA LSSPSPNTRF FPTTLDDGDL 240 NKTISSLQQG SRSRNLLPKP PKSTSALGPE TNAGIISHIR VARPPVEGRI KNQLLPRYWP 300 RITDQELQQI SGDSNSTIIP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLR 360 IQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRMD PEGKLLMGFR 420 KASIVNSTQE NRPSTIPKSV FSTESTSFSA MPENIPLMSG YSGLFQSFKG SRESSLNLSS 480 KHFNSSDFGW YLTEKNGGRN ADSPSMPVSE RKRSRNIGSK SKRLLIDAHD ALELKVSWEE 540 LQDMLRPPLS GQPTTVTIED HEFEEYEQPP VLGKRSIFTV RLSGEQEQWA QCDNCFKWRK 600 LPADYLLPPQ WTCQDNISDH SRSPCSVPDD LTPRELENLL KMNKDLNKRR SAASQRTTQA 660 HDSSDLDSQA NGIGIAGDVR EPGATSVATT TKHPRHRPGC SCIVCIQPPS GKGKHNPSCT 720 CNVCMTVKRR FKTLMMRKKK RQSEREAELG QRNQLMWSSK EETEVDSFSR QVKPEFDPSD 780 KERSGSETLA RGHSSNQLPK LPEITSMSAA RDISEAEWSN KLSF

Sequence ? help Back to Top

Protein Sequence Length: 824 aa Download sequence

MESKICMNGV CGATCSIEWK KGWPLKSGEF ASLCDKCGTA YEQLVFCDLF HSEDTGWREC  60
ISCGKRLHCG CIASCSLLEL LDSGGINCVS CVRSCQRHAT PNHEKPKAFG ASISNSVGET  120
ASTSLGSQMN GSEPNKREGS DSIDPALLLP HQNENTNRPV GQIKMEEAFH PAGESGSTFS  180
SNLCQAAAES SKNAKLDSYI GYKGVTNIHG SMVQTNLSIA LSSPSPNTRF FPTTLDDGDL  240
NKTISSLQQG SRSRNLLPKP PKSTSALGPE TNAGIISHIR VARPPVEGRI KNQLLPRYWP  300
RITDQELQQI SGDSNSTIIP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLR  360
IQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRMD PEGKLLMGFR  420
KASIVNSTQE NRPSTIPKSV FSTESTSFSA MPENIPLMSG YSGLFQSFKG SRESSLNLSS  480
KHFNSSDFGW YLTEKNGGRN ADSPSMPVSE RKRSRNIGSK SKRLLIDAHD ALELKVSWEE  540
LQDMLRPPLS GQPTTVTIED HEFEEYEQPP VLGKRSIFTV RLSGEQEQWA QCDNCFKWRK  600
LPADYLLPPQ WTCQDNISDH SRSPCSVPDD LTPRELENLL KMNKDLNKRR SAASQRTTQA  660
HDSSDLDSQA NGIGIAGDVR EPGATSVATT TKHPRHRPGC SCIVCIQPPS GKGKHNPSCT  720
CNVCMTVKRR FKTLMMRKKK RQSEREAELG QRNQLMWSSK EETEVDSFSR QVKPEFDPSD  780
KERSGSETLA RGHSSNQLPK LPEITSMSAA RDISEAEWSN KLSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	728	739	KRRFKTLMMRKK
2	728	741	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein