PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU04612.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 222aa MW: 26309.5 Da PI: 7.5939 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++lv +vk++G ++W+ a+ g++Rt+k+c++rw +yl PHU04612.1 9 RGPWTEEEDLQLVFYVKLFGDRRWDFLAKVSGLKRTGKSCRLRWVNYL 56 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ ++++ ++G++ W++Iar+++ gRt++++k++w++++ PHU04612.1 62 RGKMTPQEERVVLELHSKWGNR-WSRIARKIP-GRTDNEIKNYWRTHM 107 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MAQEEIMRRG PWTEEEDLQL VFYVKLFGDR RWDFLAKVSG LKRTGKSCRL RWVNYLNPDL 60 KRGKMTPQEE RVVLELHSKW GNRWSRIARK IPGRTDNEIK NYWRTHMRKK AQEQRKKSSI 120 SPSSSFSNSS YSSSISHEEN ERNFYDTGGL ELLKAEGEMK SSDQEQGGES MKIYSMDEIW 180 KDIELLEENE ETTNKPIMGS ISPLWDYSLD SLWKDFDWSS FR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 7e-75 | MYB family protein |