PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU04426.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 321aa MW: 36470.8 Da PI: 7.7364 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.5 | 4.1e-20 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+d+++++G+g+W+t ++ g+ R++k+c++rw +yl PHU04426.1 14 KGPWTTEEDQRLIDYIQKHGSGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.3 | 5.3e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ eE+e +++++ lG++ W++Ia +++ gRt++++k++w++ PHU04426.1 67 RGKFSFEEEETIIHLHSILGNK-WSAIAGRLP-GRTDNEIKNYWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MGRTPCCDKN GLKKGPWTTE EDQRLIDYIQ KHGSGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SFEEEETIIH LHSILGNKWS AIAGRLPGRT DNEIKNYWNT RIRKKLMRMG 120 IDPVTHSPRL DLLDLNSIFN PSIYNSCQVI NNNLSRLLGV QSLVNPELLK LANSLLSSNH 180 QNQNFLLGSN FQENQPFNSH VQNQLTSLCQ ANQIQNPIQN TSTCSDLNIQ SVPFYSDTQV 240 MQQPNVEQLS SNVSTFSSQN SQQNEWKNFT FDSALPNLST PSSSPTSLNS NSSTTSEEER 300 ESYCSMLNFD IPNILDVNEL L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 6e-97 | MYB family protein |