PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04365.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

VOZ

Protein Properties

Length: 480aa MW: 53977.2 Da PI: 6.6006

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	412.9	5.9e-127	202	421	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg pg pv+rp gi+lkd+llf+alsak+ gk+vg+pecegaatakspwna+elf PHU04365.1 202 PPPSAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYPGRPPVVRPMGIGLKDNLLFQALSAKALGKDVGVPECEGAATAKSPWNAPELF 300 89*********************944459**************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 dl+++ege irewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ewhlyeyein++da+alyrlelklvd+kk PHU04365.1 301 DLKVVEGEIIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEWHLYEYEINKYDACALYRLELKLVDGKKI 399 *********************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 +kgk+++ s+adlqk++grlta PHU04365.1 400 PKGKITNVSVADLQKQMGRLTA 421 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MRKISKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRTYDVGL LEEQVHQMLR 60 EWKSELNEPS PASSLQARTN IYVPFSSKRT KRLLLGEEDD DATSALAAPK PEPDAQKVSI 120 TGFQEGFDAT QVLQEQGFQL VDQCKGLPSM VNNTGVNNLG IATQLDYHSF DLHQEYDQQY 180 LTGFDALNLC LEDAMPPIHI SPPPSAFLGP KCALWDCPRP AMGSDWCQKS QDYCSDYHAS 240 LAPNEGYPGR PPVVRPMGIG LKDNLLFQAL SAKALGKDVG VPECEGAATA KSPWNAPELF 300 DLKVVEGEII REWLFFDKPR RAFESGNRKQ RSLPDYNGRG WHESRKQMMN EFGGLKRSYY 360 MDPQPMKNLE WHLYEYEINK YDACALYRLE LKLVDGKKIP KGKITNVSVA DLQKQMGRLT 420 AEVPLDNKRT VKGRAKASMK NVGNIHAPPV PVVPTCEGFD YGNIDPYDYL VDDMDGYFIT

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MRKISKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRTYDVGL LEEQVHQMLR  60
EWKSELNEPS PASSLQARTN IYVPFSSKRT KRLLLGEEDD DATSALAAPK PEPDAQKVSI  120
TGFQEGFDAT QVLQEQGFQL VDQCKGLPSM VNNTGVNNLG IATQLDYHSF DLHQEYDQQY  180
LTGFDALNLC LEDAMPPIHI SPPPSAFLGP KCALWDCPRP AMGSDWCQKS QDYCSDYHAS  240
LAPNEGYPGR PPVVRPMGIG LKDNLLFQAL SAKALGKDVG VPECEGAATA KSPWNAPELF  300
DLKVVEGEII REWLFFDKPR RAFESGNRKQ RSLPDYNGRG WHESRKQMMN EFGGLKRSYY  360
MDPQPMKNLE WHLYEYEINK YDACALYRLE LKLVDGKKIP KGKITNVSVA DLQKQMGRLT  420
AEVPLDNKRT VKGRAKASMK NVGNIHAPPV PVVPTCEGFD YGNIDPYDYL VDDMDGYFIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein