PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU04330.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 329aa MW: 37733 Da PI: 6.5999

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU04330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G+g+W+ ++ g+ R++k+c++rw +yl PHU04330.1 14 KGPWTPEEDQKLIQYIQVHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.2	3.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ PHU04330.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIAERLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGRTPCCDKN GLKKGPWTPE EDQKLIQYIQ VHGPGNWRNL PKNAGLQRCG KSCRLRWTNY 60 LRPDIRRGRF SFEEEETIIQ LHSVLGNKWS AIAERLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DFLDFSLLFN STQLNLSSLL GLQALVNPEI FKLANSILLS QTHENQELSL 180 QNQNSQGPEL LLQKLQQNQL LHNQSSIFQH NDQLHNQISK IPNYTPQNVS SSSSQSIQGN 240 MGSYLMNGQA FHENVISLQN YSYSASEVSE NSTIQSLNNN NNNNNQNSQN FNFDTPLSGT 300 EEEKESYCSN FNSFMKFEIP ESLDFDDLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	2e-87	MYB family protein