PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU04111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25981.2 Da PI: 8.4884 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.8e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ ++ g+ R++k+c++rw +yl PHU04111.1 16 KGPWTPEEDLKLISFIQKHGHGNWRALPKQAGLVRCGKSCRLRWINYL 63 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.7 | 2.1e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++++ +G++ W++Ia++++ gRt++++k+ w+++l PHU04111.1 69 RGNFTSQEEDTIINLHRSFGNR-WSKIASHLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGKGRRSCCD KSEVKKGPWT PEEDLKLISF IQKHGHGNWR ALPKQAGLVR CGKSCRLRWI 60 NYLRPDVKRG NFTSQEEDTI INLHRSFGNR WSKIASHLPG RTDNEIKNVW NTHLKKRLLL 120 MKKEEHNSPS STPTCSSTTL GFCSPTSSKA NDQVIDFWEY MLDTSNPTSI NNLDHFDSYS 180 KQDTTSTNTE HHQPQMADEY ECQKWLTYLE IELGLTTNEA QHQIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16490.1 | 5e-72 | MYB family protein |