PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03600.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 736aa MW: 81411.2 Da PI: 7.1291

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.5	1.3e-09	439	476	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PHU03600.1 439 FEHflHPYPKDSDKMTLAKQTGLTRSQVSNWFINARVR 476 554459******************************88 PP
2	BELL	114.7	4.9e-37	303	374	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+s+l+eVd+rY+qy++q+++++ sFe++ag+gs+k+Yt+lAl++iS++FrcLkdai++qi PHU03600.1 303 QRQELQMKKAKLVSMLDEVDQRYRQYHQQMKMIATSFEQAAGIGSSKSYTQLALHTISKQFRCLKDAISGQI 374 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MAMYYQGGSE IQADGLQTLY LMNPNYIGYA DTHHHQQQQS ANMFFLNSMP GGNLPHAALS 60 AQPHAQRHLV GVPLQAGFQD PDRPSIEEIS ASHHGLLSRF WNSADQNSSG GGGEGGGGNG 120 SQSRILSSTV VSPNSGTGGD TTTDFASQLG FQRSGLVSPT HAHHQGLSLS LSPQQQQQQQ 180 QMNFRSFPLD HHEISTTNHQ VGVLSSSPSP RTNSNNIDQT QGSGASSSFS LSKGTILGSK 240 YLKVAQDLLD EVVNVGKHIK LSDGLEDVAK EKHKLDNELI SLASDYVESS RQKNSVVELT 300 TAQRQELQMK KAKLVSMLDE VDQRYRQYHQ QMKMIATSFE QAAGIGSSKS YTQLALHTIS 360 KQFRCLKDAI SGQIKDTSKT LGEEENIGGK IEGSKLKFVD HQLRQQRALQ QLGMMQTNAW 420 RPQRGLPERA VSVLRAWLFE HFLHPYPKDS DKMTLAKQTG LTRSQVSNWF INARVRLWKP 480 MVEEMYMEEV KKNNQEQNGL DQENIMNKDI EPNNEVVGSK SNAPQEKLTI SSNIHDASPT 540 EISTSTISTS PKGGDGLLPA QTAPGFSFIG TLNMENISDQ RNNKKARNDM QNSSTSTLLS 600 VDTEINKAGE DTTIKSEKLN GNNNSTHQTR ECYPLMTPYT MHDQFGTRFN PNHQQLTTTT 660 STFHHGNGHV SLTLGLPPNS ENQHNFLSNN QNIGLGSHYN RMNNPQASHH PNISYETIDF 720 QSGKRYAAQL LQDYVS

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MAMYYQGGSE IQADGLQTLY LMNPNYIGYA DTHHHQQQQS ANMFFLNSMP GGNLPHAALS  60
AQPHAQRHLV GVPLQAGFQD PDRPSIEEIS ASHHGLLSRF WNSADQNSSG GGGEGGGGNG  120
SQSRILSSTV VSPNSGTGGD TTTDFASQLG FQRSGLVSPT HAHHQGLSLS LSPQQQQQQQ  180
QMNFRSFPLD HHEISTTNHQ VGVLSSSPSP RTNSNNIDQT QGSGASSSFS LSKGTILGSK  240
YLKVAQDLLD EVVNVGKHIK LSDGLEDVAK EKHKLDNELI SLASDYVESS RQKNSVVELT  300
TAQRQELQMK KAKLVSMLDE VDQRYRQYHQ QMKMIATSFE QAAGIGSSKS YTQLALHTIS  360
KQFRCLKDAI SGQIKDTSKT LGEEENIGGK IEGSKLKFVD HQLRQQRALQ QLGMMQTNAW  420
RPQRGLPERA VSVLRAWLFE HFLHPYPKDS DKMTLAKQTG LTRSQVSNWF INARVRLWKP  480
MVEEMYMEEV KKNNQEQNGL DQENIMNKDI EPNNEVVGSK SNAPQEKLTI SSNIHDASPT  540
EISTSTISTS PKGGDGLLPA QTAPGFSFIG TLNMENISDQ RNNKKARNDM QNSSTSTLLS  600
VDTEINKAGE DTTIKSEKLN GNNNSTHQTR ECYPLMTPYT MHDQFGTRFN PNHQQLTTTT  660
STFHHGNGHV SLTLGLPPNS ENQHNFLSNN QNIGLGSHYN RMNNPQASHH PNISYETIDF  720
QSGKRYAAQL LQDYVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	4e-88	TALE family protein