PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03283.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 357aa MW: 40019.2 Da PI: 6.648

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.5	8.5e-15	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl PHU03283.1 30 KGLWSPEEDEKLMHYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYL 77 678*******************************************97 PP
2	Myb_DNA-binding	46.2	1.1e-14	83	127	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E+e +++++ +lG++ W+ Ia++++ gRt++++k++w++ PHU03283.1 83 RGAFLPQEEEHIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNST 127 78999***************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MRKPEFSSSS SSGKNNNNNT NNNTNVKLRK GLWSPEEDEK LMHYMLTNGQ GCWSDVARNA 60 GLQRCGKSCR LRWINYLRPD LKRGAFLPQE EEHIIHLHSL LGNRWSQIAA RLPGRTDNEI 120 KNFWNSTLKK RLKNSSSSST PSPNASDSSS DHLSKDLNIG VTQQRFMTMQ KHNLMSINMD 180 STSSSSSSMA LNTINIDPLP TLDHTLINMS NGFNISPSYL STTQPCMVQG GNIVGTNNGG 240 SLFYGNNHGI FGGNLSMEGH ELYVPPLENV SIDYNQNVEN GNYVERSNHH QNNNYVNNMS 300 SLNSTSHNFN SSSNIKVENF GGIGNYWEGD ELKVGEWDLE ELMKDVSPFP FLDFQVE

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MRKPEFSSSS SSGKNNNNNT NNNTNVKLRK GLWSPEEDEK LMHYMLTNGQ GCWSDVARNA  60
GLQRCGKSCR LRWINYLRPD LKRGAFLPQE EEHIIHLHSL LGNRWSQIAA RLPGRTDNEI  120
KNFWNSTLKK RLKNSSSSST PSPNASDSSS DHLSKDLNIG VTQQRFMTMQ KHNLMSINMD  180
STSSSSSSMA LNTINIDPLP TLDHTLINMS NGFNISPSYL STTQPCMVQG GNIVGTNNGG  240
SLFYGNNHGI FGGNLSMEGH ELYVPPLENV SIDYNQNVEN GNYVERSNHH QNNNYVNNMS  300
SLNSTSHNFN SSSNIKVENF GGIGNYWEGD ELKVGEWDLE ELMKDVSPFP FLDFQVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	6e-67	MYB family protein