PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03088.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 272aa    MW: 30553 Da    PI: 10.2277
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY301e-09252272222
                 --SS-EEEEEEE--TT-SS-E CS
        WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                 +Dg++WrKYGqK++kgs +pr
  PHU03088.1 252 EDGFCWRKYGQKVMKGSLYPR 272
                 8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEVNEAVKIP IARPVTSRPR CLIYKSFSEL LTGAVDISST NVHSEMTVIA IRPKTVRLKL  60
ETNHVLVGEP SSQVGVREAP VVFLYDNILQ WVEKPKFLYK IRAKLAPRKT ISLLENKPQP  120
QPLKQNLSDG HGRTTICNDT SNETNNPAWR NQNPQKSIAY FCRIENPNDG GLTIHSSKVP  180
CFYDPIAAAR MHTAVRNSED SAKGSRKLKA TYDEPKTKIR KIKVPSSRAG TSGESTIPYI  240
ANQRTTDSEI IEDGFCWRKY GQKVMKGSLY PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.14e-10WRKY family protein