PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03038.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 289aa    MW: 31975.1 Da    PI: 7.1446
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.81.8e-152776355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  PHU03038.1 27 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFTTEEEAAEAYDIAAIKFRG 76
                9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MKHMTRQEFV AAIRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFTTE  60
EEAAEAYDIA AIKFRGLNAV TNFDMNRYDV KSILESNTLP IGGGAAKRLK EAQALESSRK  120
RDQEMMALNS SFQYGNSTAL QAYPLMQQQP FDSQPLLTLQ NHDISQYNIQ ESSSHFHQNY  180
LQTQLQLQNS SHQLYNNYLQ NNPVFLHGLM NSEGSSSGSY STGGYFGNSS GLGGISSHSI  240
SDNGGGNAHE EVALVKVDYD NMPVSGSYNG WSGESVQGSN TGVFSMWND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.13e-99AP2 family protein