PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02965.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 581aa MW: 64358.8 Da PI: 6.5641

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.4	3.8e-24	203	256	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+++ Lt+e+v+SHLQkYRl PHU02965.1 203 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMGIPWLTRENVASHLQKYRL 256 68*****************.9*****************************8 PP
2	Myb_DNA-binding	41.3	3.5e-13	205	255	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ PHU02965.1 205 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMGiPWLTRENVASHLQKYR 255 678***********************************************7 PP
3	Response_reg	79.5	1.1e-26	29	137	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+k y +v+++ ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga PHU02965.1 29 VLVVDDDPTWLKILEKMLKKCSY-QVTTCGLAREALYLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 123 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ PHU02965.1 124 DYLLKPIRMKELRN 137 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MMMENTSKNS GGFSTPRSDN NTFPAGLRVL VVDDDPTWLK ILEKMLKKCS YQVTTCGLAR 60 EALYLLRERK DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH 120 GACDYLLKPI RMKELRNIWQ HVLRKKMQEA RDVGNHELDQ YDEVWMLNGA EILSGKKRKD 180 FDNKHDEKEM SEPRGVDSSS MKKARVVWTV DLHQKFVKAV NQIGFDKVGP KKILDLMGIP 240 WLTRENVASH LQKYRLYLTR LQKENEVKAS FCGVKHPDVS SKETSSSLSL QNPVDVCTDV 300 TNDKYGGVSG GKAIVQNGKS SICESKVKVV VSVPAAEPSS VVGDNFDSPA AVSKIGLNDS 360 FGLVNTNVKN SKVPTTYCST GEAPQPQYKQ DFNQSANGSS HQPLPVVSHQ IPVDHTQETC 420 FLSHVPSREE RDRHPDTKNK PSFFKSKSEG VGKYSPIEST INLFQQVNQQ ANFHTLQQMA 480 STTWTGTSHN VVNGPQSSAG NLTSRSGSIV ASAGEDMCGA SILGECFLAN NGLPNTEQFG 540 YNDPQPISGV PTCLYDTLRF DYEYPVDSLE GIVMDQGLFI V

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MMMENTSKNS GGFSTPRSDN NTFPAGLRVL VVDDDPTWLK ILEKMLKKCS YQVTTCGLAR  60
EALYLLRERK DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH  120
GACDYLLKPI RMKELRNIWQ HVLRKKMQEA RDVGNHELDQ YDEVWMLNGA EILSGKKRKD  180
FDNKHDEKEM SEPRGVDSSS MKKARVVWTV DLHQKFVKAV NQIGFDKVGP KKILDLMGIP  240
WLTRENVASH LQKYRLYLTR LQKENEVKAS FCGVKHPDVS SKETSSSLSL QNPVDVCTDV  300
TNDKYGGVSG GKAIVQNGKS SICESKVKVV VSVPAAEPSS VVGDNFDSPA AVSKIGLNDS  360
FGLVNTNVKN SKVPTTYCST GEAPQPQYKQ DFNQSANGSS HQPLPVVSHQ IPVDHTQETC  420
FLSHVPSREE RDRHPDTKNK PSFFKSKSEG VGKYSPIEST INLFQQVNQQ ANFHTLQQMA  480
STTWTGTSHN VVNGPQSSAG NLTSRSGSIV ASAGEDMCGA SILGECFLAN NGLPNTEQFG  540
YNDPQPISGV PTCLYDTLRF DYEYPVDSLE GIVMDQGLFI V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-116	ARR-B family protein