PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02559.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 289aa    MW: 32147.5 Da    PI: 7.8466
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1062.3e-3365123360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreveee 60 
                  +v+YkeClkNhAas+GghavDGCgEf++s++++ +++ +l CaACgCHRnFHRre++e+
   PHU02559.1  65 AVTYKECLKNHAASIGGHAVDGCGEFIASPESTqSNPISLSCAACGCHRNFHRREPSEN 123
                  799**************************999889********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDLTCTNNPT PTPSHTPTKT PDSEIDTPPL IKPLSFTNFT FKNHHHNHNH NHNHPPPCAP  60
PSSTAVTYKE CLKNHAASIG GHAVDGCGEF IASPESTQSN PISLSCAACG CHRNFHRREP  120
SENQDFISFR HHILPPIHHF SPSSSPSSSP SPPPPLPQPQ PQPIKAEKPC GRKRFRTKFT  180
QEQKEKMHLF SEKLGWKLQK VDEVAVDEFC REVGVGKGVL RVWMHNNKNT FGKKEHSFEN  240
KNGFNMNGGT SSNEDNHRHN DNNNDNNDNS TSNCELHLHI STNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.18e-52ZF-HD family protein