PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02108.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 328aa    MW: 36247.8 Da    PI: 6.4443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.2e-14132178354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  PHU02108.1 132 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 178
                 79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MQPQSFMNPV HFQSNSEMSQ ILPWTLPPVQ PFMNPVHHHH DPFLLPPPPS PYGLFNRRPQ  60
FGYEGGGGGG ATSSSSSDHH GLRFISDTLV GQVVHHHQPG SVSVAAPFGL QAELQKMTAQ  120
EIMDAKALAA SKSHSEAERR RRERINNHLA KLRSLLPNTT KTDKASLLAE VIQHVKELKR  180
QTSLIAETSP VPTEIDELTV DNATSDEDGK FLIKASLCCE DRSDLLPDLI KTLKALRLKT  240
LKAEITTLGG RVRNVLFITP DDYYCNNQEL DTCSNGGDDD DDCQMQQPQY CISSIQEALK  300
AVMEKSSGDD STSASVKRQR TNNINILT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138143ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-78bHLH family protein