PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02018.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 302aa    MW: 34116.8 Da    PI: 10.2
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.23.1e-11191231650
         AP2   6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50 
                 Vr +k +g+++ eIrd +     r kr++lg+f+taeeA + +   +
  PHU02018.1 191 VRKRK-SGKFATEIRDpF-----RkKRIWLGTFDTAEEASEVYQSKK 231
                 89888.7*********76.....45**************99886655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MKSPAKQDFI EGNQEEDFIQ RKIRVKIFDP DATESSSDDD EQQEKRPKYI VHEIIQEKVK  60
IQSFSINNGS PFDFYQFSGK LSPMVRKRKC GKLGTEEKLK VAIFAKSENG SSGDLPLMAD  120
SQTSDSLKNK KFTTEYEEKL KVAKNAKVKR AISAKSEIGS SSSEVKIPSL SLINRKSLSF  180
GQVSGKLPPM VRKRKSGKFA TEIRDPFRKK RIWLGTFDTA EEASEVYQSK KLEFQEKLNK  240
AKNANKKKAI SAKCELGLSS SDPPLMADAQ TSDSSNELGD QFNKAKNAKE KGYFCKTWTW  300
FF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192211RKRKSGKFATEIRDPFRKKR
2193212RKRKSGKFATEIRDPFRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-14ERF family protein