PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU01683.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 520aa MW: 58808.3 Da PI: 8.5836 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.1 | 1.3e-17 | 18 | 73 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r+R t+ q e Le+++++++yp+++++ e A++lgLte+qV+ WF+ rR k+k+ PHU01683.1 18 RPRIIKTRAQREGLEKFYKEHKYPTESMKLEVAHSLGLTEKQVSGWFCHRRLKDKR 73 8999**************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 520 aa Download sequence |
DSHEMHSEED KGHIGKNRPR IIKTRAQREG LEKFYKEHKY PTESMKLEVA HSLGLTEKQV 60 SGWFCHRRLK DKRLLRREIN ANGRQDRSSG IIQDRGSGFR QDSCGSTKQG DDKYFDHREV 120 ESRRLTGPEV SAADVMRDVA VQYRAESNLI EDTPSGSSSS LRDARFSQNV ESLDMATSRY 180 LPCNETTGLK SVKPRTGPSG YLKVKGKVEN ASITAVKRQL GSLYQRDGPP LSVEFDMLPP 240 GAFDSPVQTP VDDPEYTGEP VLAPTADFAE VYKQSDSRIG YGLISKTNSR VSDLDGASFK 300 KSSKSAYPEY YINQKPRQNS SMHNDDRYYL GRNSSTEMCK VSGREVGVDG RYNNMFMAKR 360 DGTEIKTSPG SSGGFRSPYT GKVNREQVAP RFTNCNEASL KIVEEEDSER KPSNFVRKEI 420 KQRYFPERVL SGKVEKDYLH VERPAVDESY NVDRMKMPWE NEMKAAKRAR DEAPSHQEYM 480 RKAPVTIMPS QTNHPIRSAA ELSSSFSEDD KTEETSSFEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G03250.1 | 9e-57 | HB-other family protein |